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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Hnrnpa2b1, heterogeneous nuclear ribonucleoprotein A2/B1
Sequence ID:NM_016806
NM_182650
Entrez Gene ID:53379
Ensembl ID:ENSMUSG00000004980

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:6 B3|6

Chromosomal Position (from UCSC)

Chromosomal Position:6: 51462760 - 51469772

 Exon Info From UCSC:
NM_016806
NM_182650

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9054154Full LengthBC145588heterogeneous nuclear ribonucleoprotein A2/B1
9055865Full LengthBC141253heterogeneous nuclear ribonucleoprotein A2/B1
5356316IncompleteBC059107heterogeneous nuclear ribonucleoprotein A2/B1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_058086  NP_872591  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_016806 NP_058086 O88569 RRM_1
NM_182650 NP_872591   RRM_1

Related Sequences

 
mRNAGenPeptSwissProt
AF073993 AAC26867 O88569
BC059107 AAH59107 O88569
BC141253 AAI41254 O88569
BC145588 AAI45589 B7ZP22
AF406651 AAK98601 O88569
AK089012 BAC40700 O88569
AK137214 BAE23274 O88569
AK139427 BAE24008 Q3UTH2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Hnrnpa2b1 NP_058086 H.sapiens HNRNPA2B1 3181 Gene Info NP_112533 99
R.norvegicus Hnrnpa2b1 362361   NP_001098083 99
S.cerevisiae HRP1 853997   NP_014518 42
A.thaliana AT3G07810 819972   NP_566321 40
S.pombe SPBC660.15 2541150   NP_595094 36

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)