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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Bet1l, blocked early in transport 1 homolog (S. cerevisiae)-like
Sequence ID:NM_018742
Entrez Gene ID:54399
Ensembl ID:ENSMUSG00000025484

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:7 F5|7

Chromosomal Position (from UCSC)

Chromosomal Position:7: 140854455 - 140856239

NM_018742 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11240148039282148040521
12411297148040663148040719
12981389148040972148041063
13901552148042119148042281

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3667829Full LengthBC019730blocked early in transport 1 homolog (S. cerevisiae)-like
5715703IncompleteBC052402blocked early in transport 1 homolog (S. cerevisiae)-like

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_061212  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_018742 NP_061212 O35153 SNARE

Related Sequences

 
mRNAGenPeptSwissProt
AF003999 AAB66321 O35153
BC019730 AAH19730 I6L979
AK003184 BAB22627 Q9D1R8
AK011508 BAB27666 O35153
AK158871 BAE34704 Q9D1R8
AK161239 BAE36260 O35153

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Bet1l NP_061212 R.norvegicus Bet1l 54400   NP_062241 98
H.sapiens BET1L 51272 Gene Info NP_001092257 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)