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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Il1a, interleukin 1 alpha
Sequence ID:NM_010554
Entrez Gene ID:16175
Ensembl ID:ENSMUSG00000027399

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 F|2 73.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:2: 129299610 - 129309972

NM_010554 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11290129125345129126634
12911415129128608129128732
14161589129130408129130581
15901818129132199129132427
18191867129133618129133666
18681922129134790129134844
19231974129135656129135707

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3599550Full LengthBC003727interleukin 1 alpha

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034684  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010554 NP_034684 P01582
Q3U0Y6
IL1
IL1_propep

Related Sequences

 
mRNAGenPeptSwissProt
M14639 AAA40058 Q62161
BC003727 AAH03727 P01582
Q3U0Y6
AK156449 BAE33715 P01582
Q3U0Y6
X01450 CAA25682 P01582
Q3U0Y6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Il1a NP_034684 R.norvegicus Il1a 24493   NP_058715 83
H.sapiens IL1A 3552 Gene Info NP_000566 62

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta