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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Lhx8, LIM homeobox protein 8
Sequence ID:NM_010713
Entrez Gene ID:16875
Ensembl ID:ENSMUSG00000096225

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3|3 H3-H4

Chromosomal Position (from UCSC)

Chromosomal Position:3: 154306295 - 154330560

NM_010713 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
14725153969257153969968
726909153974503153974686
9101005153979706153979801
10061109153984590153984693
11101330153985204153985424
13311452153987505153987626
14531614153990968153991129
16151701153991318153991404
17021990153993235153993523

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9053316Full LengthBC144768LIM homeobox protein 8
40129796Full LengthBC125281LIM homeobox protein 8
40129798Full LengthBC125283LIM homeobox protein 8

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034843  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010713 NP_034843 O35652 Homeobox
LIM

Related Sequences

 
mRNAGenPeptSwissProt
BC125281 AAI25282 O35652
BC125283 AAI25284 O35652
BC144768 AAI44769 O35652
D49658 BAA21649 O35652
AK160121 BAE35644 Q3TVH4
AK165733 BAE38359 O35652
AJ000338 CAA04012 O35652

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Lhx8 NP_034843 R.norvegicus Lhx8 365963   NP_001012219 100
H.sapiens LHX8 431707 Gene Info NP_001001933 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)