Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Slc5a7, solute carrier family 5 (choline transporter), member 7
Sequence ID:NM_022025
Entrez Gene ID:63993
Ensembl ID:ENSMUSG00000023945

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17|17 D

Chromosomal Position (from UCSC)

Chromosomal Position:17: 54276517 - 54297136

NM_022025 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
2135765441291654416471
357737945441799954418216
379539485442104754421200
394940925442348654423629
409342415442667954426827
424243975443226054432415
439845115443313854433251
451247445443628354436515
474551985443790554438358

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6851099Full LengthBC065089solute carrier family 5 (choline transporter), member 7

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_071308  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_022025 NP_071308 Q8BGY9 SSF

Related Sequences

 
mRNAGenPeptSwissProt
AF276872 AAG36945 Q8BGY9
BC065089 AAH65089 Q8BGY9
AK034415 BAC28702 Q8BGY9
AK053063 BAC35253 Q8BGY9
AK164116 BAE37635 Q3TPV0
AJ401467 CAC03719 Q8BGY9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Slc5a7 NP_071308 R.norvegicus Slc5a7 85426   NP_445973 99
H.sapiens SLC5A7 60482 Gene Info NP_068587 93
A.gambiae AgaP_AGAP002366 1273596   XP_312589 61
D.melanogaster CG7708 42245   NP_650743 61
C.elegans cho-1 178274   NP_502539 55

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)