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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Aco2, aconitase 2, mitochondrial
Sequence ID:NM_080633
Entrez Gene ID:11429
Ensembl ID:ENSMUSG00000022477

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:15 E1|15

Chromosomal Position (from UCSC)

Chromosomal Position:15: 81872599 - 81875630

 Exon Info From UCSC:
NM_080633

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3158239Full LengthBC004645aconitase 2, mitochondrial
4238599Full LengthBC094462aconitase 2, mitochondrial

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_542364  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_080633 NP_542364 Q99KI0 EC 4.2.1.3 Aconitase
Aconitase_C

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC004645 AAH04645 Q99KI0 EC 4.2.1.3
BC094462 AAH94462 Q99KI0 EC 4.2.1.3
AK143917 BAE25602 Q99KI0 EC 4.2.1.3
AK144207 BAE25770 Q99KI0 EC 4.2.1.3
AK145511 BAE26479 Q99KI0 EC 4.2.1.3
AK150027 BAE29252 Q99KI0 EC 4.2.1.3
AK165411 BAE38169 Q99KI0 EC 4.2.1.3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Aco2 NP_542364 R.norvegicus Aco2 79250   NP_077374 99
H.sapiens ACO2 50 Gene Info NP_001089 97
C.elegans aco-2 176121   NP_741235 76
A.gambiae AgaP_AGAP007852 1278105   XP_317642 74
D.melanogaster Acon 44149   NP_001163030 73
S.cerevisiae ACO1 851013   NP_013407 68
S.pombe SPAC24C9.06c 2541450   NP_594031 68
N.crassa NCU02366 3875941   XP_959787 66

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)