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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. H2afj, H2A histone family, member J
Sequence ID:NM_177688
Entrez Gene ID:232440
Ensembl ID:ENSMUSG00000060032

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 G1|6

Chromosomal Position (from UCSC)

Chromosomal Position:6: 136808323 - 136810074

NM_177688 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11827136756768136758594

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
1383389Full LengthBC099606H2A histone family, member J
5055276Full LengthBC024397H2A histone family, member J

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_808356  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_177688 NP_808356 Q8R1M2 Histone

Related Sequences

 
mRNAGenPeptSwissProt
BC024397 AAH24397 Q8R1M2
BC099606 AAH99606 Q8R1M2
AK053755 BAC35508 Q8R1M2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus H2afj NP_808356 R.norvegicus H2afj 690795   NP_001103080 100
H.sapiens H2AFJ 55766 Gene Info NP_808760 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)