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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Tapbp, TAP binding protein
Sequence ID:NM_001025313
NM_009318
Entrez Gene ID:21356
Ensembl ID:ENSMUSG00000024308

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17 B1|17 18.41 cM

Chromosomal Position (from UCSC)

Chromosomal Position:17: 33919636 - 33928217

 Exon Info From UCSC:
NM_001025313
NM_009318

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4223922Full LengthBC015074TAP binding protein

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001025313 NP_001020484 Q3TCU5  
NM_009318 NP_033344 Q9R233
Q3U9A3
 

Related Sequences

 
mRNAGenPeptSwissProt
AF043943 AAC61676 Q9R233
AF106278 AAD17964 Q9R233
BC015074 AAH15074 Q91WI5
AY734468 AAU45097 Q5XW52
AY734475 AAU45098 Q5XW48
AY734469 AAU45099 Q5XW51
AY734470 AAU45100 Q5XW50
AY734477 AAU50684 Q5XW46
AY734476 AAU50685 Q5XW47
AY734471 AAU50686 Q5XW49
AK014566 BAB29432 Q9D679
AK054174 BAC35681 Q8C6N4
AK151134 BAE30142 Q9R233
Q3U9A3
AK151807 BAE30706 Q3TCU5
AK151878 BAE30764 Q9R233
Q3U9A3
AK152019 BAE30881 Q9R233
Q3U9A3
AK152726 BAE31448 Q3U7C1
AK169697 BAE41312 Q3TED6
AK170528 BAE41860 Q3TCU5
AJ316613 CAC70721 Q9R233
Q3U9A3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tapbp NP_001020484 R.norvegicus Tapbp 25217   NP_149089 86
H.sapiens TAPBP 6892 Gene Info NP_003181 75

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)