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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Limk1, LIM-domain containing, protein kinase
Sequence ID:NM_010717
Entrez Gene ID:16885
Ensembl ID:ENSMUSG00000029674

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 G2|5 75.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:5: 134663943 - 134668419

 Exon Info From UCSC:
NM_010717

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100062254Full LengthBC156778LIM-domain containing, protein kinase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034847  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_010717 NP_034847 P53668 EC 2.7.11.1 Pkinase
LIM
PDZ

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U14166 AAC52147 P53668 EC 2.7.11.1
U15159 AAC52254 P53668 EC 2.7.11.1
BC156778 AAI56779    
AK139231 BAE23926 Q3UTQ4  
AK141813 BAE24841 Q3UR47  
AK170166 BAE41612 Q3TDI9  
AK172083 BAE42817 Q3TA53  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Limk1 NP_034847 R.norvegicus Limk1 65172   NP_113915 98
H.sapiens LIMK1 3984 Gene Info NP_002305 95
A.gambiae AgaP_AGAP011710 1280929   XP_320802 51
D.melanogaster LIMK1 32207   NP_511139 50

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta