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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Lcp1, lymphocyte cytosolic protein 1
Sequence ID:NM_001247984
NM_008879
Entrez Gene ID:18826
Ensembl ID:ENSMUSG00000021998

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, pineal gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:14 D3|14 42.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:14: 75212370 - 75230841


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3486993Full LengthBC022943lymphocyte cytosolic protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032905  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001247984 NP_001234913    
NM_008879 NP_032905 Q61233 efhand
CH

Related Sequences

 
mRNAGenPeptSwissProt
U82610 AAC53012  
BC022943 AAH22943 Q61233
D37837 BAA07085 Q61233
AK009211 BAB26141 Q61233
AK030987 BAC27205 Q61233
AK030996 BAC27208 Q61233
AK088202 BAC40207 Q61233
AK030806 BAE20456 Q61233
AK149790 BAE29087 Q61233
AK151155 BAE30161 Q61233
AK151542 BAE30488 Q3U9M7
AK151720 BAE30639 Q3U9M7
AK152668 BAE31403 Q3U9M7
AK152891 BAE31574 Q61233
AK152902 BAE31583 Q3U6Z1
AK153061 BAE31687 Q3U6N7
AK153082 BAE31707 Q61233
AK153206 BAE31806 Q61233
AK167261 BAE39375 Q3TJX0
AK169728 BAE41332 Q61233
AK169833 BAE41398 Q61233
AK171751 BAE42649 Q3TAL9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Lcp1 NP_032905 R.norvegicus Lcp1 306071   NP_001012044 99
H.sapiens LCP1 3936 Gene Info NP_002289 97
C.elegans plst-1 3564941   NP_500061 59
C.elegans Y73B3B.1 190640   NP_508051 57
A.gambiae AgaP_AGAP004071 1270874   XP_309626 55
D.melanogaster Fim 32721   NP_523385 55
S.pombe fim1 2539765   NP_596289 45
N.crassa NCU03992 3872724   XP_956577 44
S.cerevisiae SAC6 851707   NP_010414 42
A.thaliana FIM1 828777   NP_001031726 40
A.thaliana AT5G55400 835633   NP_200351 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)