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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Casq2, calsequestrin 2
Sequence ID:NM_009814
Entrez Gene ID:12373
Ensembl ID:ENSMUSG00000027861

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3|3 F3

Chromosomal Position (from UCSC)

Chromosomal Position:3: 102086509 - 102146306

 Exon Info From UCSC:
NM_009814

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8860687Full LengthBC137668calsequestrin 2
9055571Full LengthBC140959calsequestrin 2
30603069Full LengthBC092229calsequestrin 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033944  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009814 NP_033944 O09161 Calsequestrin

Related Sequences

 
mRNAGenPeptSwissProt
AF068244 AAC69472 O09161
U91483 AAC82512 O09161
BC092229 AAH92229 O09161
BC137668 AAI37669 B9EHC7
BC140959 AAI40960 O09161

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Casq2 NP_033944 R.norvegicus Casq2 29209   NP_058827 96
H.sapiens CASQ2 845 Gene Info NP_001223 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)