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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Zscan20, Zinc finger and SCAN domains 20
Sequence ID:NM_177758
Entrez Gene ID:269585
Ensembl ID:ENSMUSG00000061894

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 D2.2|4

Chromosomal Position (from UCSC)

Chromosomal Position:4: 128585375 - 128610034

NM_177758 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
753380128260782128264087
33813809128265259128265687
38104499128266695128267384
45004584128268716128268800
45854661128269059128269135
46624833128269578128269749
48345341128281448128281955
53425446128287237128287341

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6825639Full LengthBC065079zinc finger and SCAN domains 20
30611085Full LengthBC076602zinc finger and SCAN domains 20

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_808426  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_177758 NP_808426 B2KFW1 zf-C2H2

Related Sequences

 
mRNAGenPeptSwissProt
BC065079 AAH65079 B2KFW1
BC076602 AAH76602 B2KFW1
AK047820 BAC33164 B2KFW1
AK144249 BAE25797 B2KFW1
AK153688 BAE32146 B2KFW1
AK153845 BAE32209 B2KFW1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Zscan20 NP_808426 R.norvegicus Zscan20 500549   XP_575911 87
H.sapiens ZSCAN20 7579 Gene Info NP_660281 77

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)