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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Usp16, Ubiquitin specific peptidase 16
Sequence ID:NM_024258
Entrez Gene ID:74112
Ensembl ID:ENSMUSG00000025616

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16 C3.3|16

Chromosomal Position (from UCSC)

Chromosomal Position:16: 87455010 - 87483511

 Exon Info From UCSC:
NM_024258

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3582180Full LengthBC003278ubiquitin specific peptidase 16
3586657IncompleteBC004577ubiquitin specific peptidase 16

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_077220  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_024258 NP_077220 Q99LG0 EC 3.4.19.12 UCH
zf-UBP

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC003278 AAH03278 Q99LG0 EC 3.4.19.12
BC004577 AAH04577 Q99LG0 EC 3.4.19.12
AK160038 BAE35580 Q99LG0 EC 3.4.19.12

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Usp16 NP_077220 R.norvegicus Usp16 288306   NP_001093971 92
H.sapiens USP16 10600 Gene Info NP_001001992 84
S.pombe ubp7 2541845   NP_593108 29

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)