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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Myod1, myogenic differentiation 1
Sequence ID:NM_010866
Entrez Gene ID:17927
Ensembl ID:ENSMUSG00000009471

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 B4|7 23.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:7: 46376473 - 46379092

NM_010866 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
18265363184353632668
8279055363310953633187
90618545363351353634461

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40046317Full LengthBC103613myogenic differentiation 1
40046318Full LengthBC103619myogenic differentiation 1
40046319Full LengthBC103618myogenic differentiation 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034996  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010866 NP_034996 P10085 HLH
Basic

Related Sequences

 
mRNAGenPeptSwissProt
M84918 AAA39798 P10085
M18779 AAA39799 P10085
BC103613 AAI03614 P10085
BC103618 AAI03619 P10085
BC103619 AAI03620 P10085
AK076157 BAC36224 P10085
AK142859 BAE25213 P10085

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Myod1 NP_034996 R.norvegicus Myod1 337868   NP_788268 94
H.sapiens MYOD1 4654 Gene Info NP_002469 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta