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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Vamp7, vesicle-associated membrane protein 7
Sequence ID:NM_011515
Entrez Gene ID:20955

Database Links

UniGeneEntrez GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:X|X 0.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:Unknown

NM_011515 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
118071073712543
180819001407414166
190119682162721694
196920592487124961
206021972897529112
219822553058730644
225624103242932583
241125343902439147

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3601755Full LengthBC003764vesicle-associated membrane protein 7

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035645  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011515 NP_035645 P70280 Synaptobrevin

Related Sequences

 
mRNAGenPeptSwissProt
BC003764 AAH03764 P70280
AK002825 BAB22386 P70280
AK005487 BAB24073 Q9CW09
AK011510 BAB27667 P70280
AK089035 BAC40712 P70280
AK165299 BAE38126 P70280
X96737 CAA65509 P70280

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Vamp7 NP_035645 H.sapiens VAMP7 6845 Gene Info NP_005629 97
R.norvegicus Vamp7 85491   NP_445983 95
D.melanogaster CG1599 36015   NP_610524 52
A.gambiae AgaP_AGAP000700 1272287   XP_311230 51
A.thaliana VAMP714 832297   NP_197628 42
N.crassa NCU06370 3878552   XP_962404 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)