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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Mm. Smg9, smg-9 homolog, nonsense mediated mRNA decay factor (C. elegans)
Sequence ID:NM_028047
Entrez Gene ID:71997
Ensembl ID:ENSMUSG00000002210

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:7 A3|7

Chromosomal Position (from UCSC)

Chromosomal Position:7: 24399629 - 24422777

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4988361Full LengthBC034211RIKEN cDNA 1500002O20 gene

Protein Infomation

NM_028047 NP_082323 Q9DB90  

Related Sequences

BC034211 AAH34211 Q9DB90
AK005126 BAB23829 Q9DB90
AK039368 BAC30328 Q9DB90
AK141576 BAE24745 Q9DB90
AK161454 BAE36406 Q9DB90
AK169651 BAE41275 Q9DB90

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus 1500002O20Rik NP_082323 R.norvegicus Smg9 365215   NP_001014265 99
H.sapiens SMG9 56006 Gene Info NP_061981 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)