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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Dctn6, dynactin 6
Sequence ID:NM_011722
Entrez Gene ID:22428
Ensembl ID:ENSMUSG00000031516

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, t-cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:8 A4|8

Chromosomal Position (from UCSC)

Chromosomal Position:8: 34090420 - 34108443

NM_011722 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
14203515347635153895
4215633515556435155706
5646113515668235156729
6127003515793735158025
7018063516024235160347
8078713516939535169459
8729643517147235171564

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4486579Full LengthBC029249dynactin 6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035852  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011722 NP_035852 Q9WUB4 Hexapep

Related Sequences

 
mRNAGenPeptSwissProt
AF124788 AAD30477 Q9WUB4
AF190796 AAF05616 Q9WUB4
BC029249 AAH29249 Q9WUB4
AK003618 BAB22892 Q9WUB4
AK088312 BAC40276 Q9WUB4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Dctn6 NP_035852 R.norvegicus Dctn6 290798   NP_001099555 99
H.sapiens DCTN6 10671 Gene Info NP_006562 96
A.gambiae AgaP_AGAP006924 5667126   XP_001688103 49
D.melanogaster l(2)37Ce 35195   NP_609949 49
C.elegans Y54E10A.5 171891   NP_491116 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta