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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Saa1, serum amyloid A 1
Sequence ID:NM_009117
Entrez Gene ID:20208
Ensembl ID:ENSMUSG00000074115

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 B4|7 23.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:7: 46740497 - 46742980

NM_009117 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13445399586853996211
3454835399662553996763
4845755399780153997892
5766075399831853998349

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30310171Full LengthBC087933serum amyloid A 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033143  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009117 NP_033143 P05366
Q5I0U6
SAA

Related Sequences

 
mRNAGenPeptSwissProt
BC087933 AAH87933 P05366
Q5I0U6
AK136475 BAE22994 Q3UWC2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Saa1 NP_033143 M.musculus Saa2 20209 Gene Info NP_035444 93
H.sapiens SAA1 6288 Gene Info NP_000322 73

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)