Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Gzmb, granzyme B
Sequence ID:NM_013542
Entrez Gene ID:14939
Ensembl ID:ENSMUSG00000015437

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:14 D3|14 20.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:14: 56258839 - 56262241

NM_013542 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
37075687769456878398
7089685687901856879278
96911045687941556879550
110512525687992356880070
125314185688093156881096

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3592898Full LengthBC002085granzyme B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038570  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_013542 NP_038570 Q3TZH4
P04187
EC 3.4.21.79 Trypsin

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M12302 AAA37383 Q3TZH4
P04187
EC 3.4.21.79
BC002085 AAH02085 Q3TZH4
P04187
EC 3.4.21.79
AK157856 BAE34234 Q3TZH4
P04187
EC 3.4.21.79
AK167770 BAE39803 Q3TIP3  
X04072 CAA27715 Q3TZH4
P04187
EC 3.4.21.79
CT010272 CAJ18480 Q4FJY0  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Gzmb NP_038570 R.norvegicus Gzmb 171528   NP_612526 81
R.norvegicus LOC100361468 100361468   XP_002728303 78
R.norvegicus LOC100361261 100361261   XP_002728331 77
R.norvegicus RGD1561819 502004   XP_577431 77
H.sapiens GZMB 3002 Gene Info NP_004122 69

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta