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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Nthl1, nth (endonuclease III)-like 1 (E.coli)
Sequence ID:NM_008743
Entrez Gene ID:18207
Ensembl ID:ENSMUSG00000041429

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17|17 A3

Chromosomal Position (from UCSC)

Chromosomal Position:17: 24632735 - 24638837

NM_008743 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11732476962624769798
1744122477087124771109
4135832477166924771839
5847432477253224772691
7448492477536824775473
85010792477555224775781

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861874Full LengthBC138852nth (endonuclease III)-like 1 (E.coli)
8861877Full LengthBC138855nth (endonuclease III)-like 1 (E.coli)
9054001IncompleteBC145443nth (endonuclease III)-like 1 (E.coli)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032769  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_008743 NP_032769 O35980 EC 4.2.99.18 HHH
HhH-GPD

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC138852 AAI38853 B2RSG2  
BC138855 AAI38856 B2RSG2  
BC145443 AAI45444 B7ZNV0  
AB006812 BAA22080 O35980 EC 4.2.99.18
Y09688 CAA70866 O35980 EC 4.2.99.18

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Nthl1 NP_032769 R.norvegicus Nthl1 29541   NP_001099198 93
H.sapiens NTHL1 4913 Gene Info NP_002519 82
D.melanogaster CG9272 35365   NP_610078 53
A.gambiae AgaP_AGAP002388 1273573   XP_312566 52
C.elegans nth-1 187770   NP_497859 52
A.thaliana ATNTH1 817703   NP_001077988 52
S.pombe nth1 2543510   NP_593210 50
A.thaliana NTH2 837100   NP_973767 49
N.crassa NCU06654 3876847   XP_960699 48
S.cerevisiae NTG2 854114   NP_014599 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)