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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Mybbp1a, MYB binding protein (P160) 1a
Sequence ID:NM_016776
Entrez Gene ID:18432
Ensembl ID:ENSMUSG00000040463

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, testis, thymus, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11 B4|11 40.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:11: 72441354 - 72451768

 Exon Info From UCSC:
NM_016776

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5363740Full LengthBC048858MYB binding protein (P160) 1a
30057169Full LengthBC052889MYB binding protein (P160) 1a
3592630IncompleteBC004078MYB binding protein (P160) 1a
3666430IncompleteBC015070MYB binding protein (P160) 1a
6826362IncompleteBC060167MYB binding protein (P160) 1a

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_058056  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_016776 NP_058056 Q3U2W2
Q7TPV4
DNA_pol_phi

Related Sequences

 
mRNAGenPeptSwissProt
U63648 AAC39954 Q7TPV4
BC004078 AAH04078 Q7TPV4
BC015070 AAH15070 A0JLT5
BC048858 AAH48858 Q3U2W2
Q7TPV4
BC052889 AAH52889 Q7TPV4
AK155074 BAE33028 Q3U2W2
Q7TPV4
AK166533 BAE38836 Q3TLF6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Mybbp1a NP_058056 R.norvegicus Mybbp1a 60571   NP_113856 89
H.sapiens MYBBP1A 10514 Gene Info NP_055335 71

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)