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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Gabarapl1, gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
Sequence ID:NM_020590
Entrez Gene ID:57436
Ensembl ID:ENSMUSG00000030161

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, stem cell, stomach, testis, thymus, thyroid, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:6 F3|6

Chromosomal Position (from UCSC)

Chromosomal Position:6: 129533167 - 129542333

NM_020590 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3585132Full LengthBC004602gamma-aminobutyric acid (GABA(A)) receptor-associated protein-like 1
3711973Full LengthBC024706gamma-aminobutyric acid (GABA(A)) receptor-associated protein-like 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_065615  

Protein Infomation

NM_020590 NP_065615 Q8R3R8 MAP1_LC3

Related Sequences

BC004602 AAH04602 Q8R3R8
BC024706 AAH24706 Q8R3R8
AF180518 AAK16236 Q8R3R8
AB041648 BAA95100 Q8R3R8
AK011975 BAB27950 Q8R3R8
AK014083 BAB29146 Q8R3R8
AK015049 BAB29690 Q8R3R8
AK018687 BAB31345 Q8R3R8
AK159015 BAE34769 Q8R3R8
AK167500 BAE39576 Q8R3R8
AK168921 BAE40734 Q8R3R8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus Gabarapl1 NP_065615 H.sapiens GABARAPL1 23710 Gene Info NP_113600 100
R.norvegicus Gabarapl1 689161   NP_001037759 100
D.melanogaster Atg8b 42132   NP_650649 74
A.thaliana ATG8C 842499   NP_001185291 56

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)