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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Pclo, piccolo (presynaptic cytomatrix protein)
Sequence ID:NM_001110796
NM_011995
Entrez Gene ID:26875
Ensembl ID:ENSMUSG00000061601

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 A2|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 14514992 - 14860184

 Exon Info From UCSC:
NM_001110796
NM_011995

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_036125  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001110796 NP_001104266    
NM_011995 NP_036125   C2
PDZ
zf-piccolo

Related Sequences

 
mRNAGenPeptSwissProt
AF181269 AAD55786 Q9QYX7
AB093247 BAC41431 Q8CHE8
AB083477 BAC53723 Q9QYX7
AB083478 BAC53724 Q9QYX7
Y19185 CAB60731 Q9QYX7
Y19186 CAB60732 Q9QYX7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pclo NP_036125 R.norvegicus Pclo 56768   NP_064483 94
H.sapiens PCLO 27445 Gene Info NP_055325 84

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)