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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Satb2, special AT-rich sequence binding protein 2
Sequence ID:NM_139146
Entrez Gene ID:212712
Ensembl ID:ENSMUSG00000038331

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 C1.3|1

Chromosomal Position (from UCSC)

Chromosomal Position:1: 56796266 - 56971328

 Exon Info From UCSC:
NM_139146

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861645Full LengthBC138625special AT-rich sequence binding protein 2
8861646Full LengthBC138626special AT-rich sequence binding protein 2
4983969IncompleteBC026632special AT-rich sequence binding protein 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_631885  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_139146 NP_631885 Q8VI24
Q546B3
CUT

Related Sequences

 
mRNAGenPeptSwissProt
BC138625 AAI38626 Q546B3
BC138626 AAI38627 Q546B3
AF319623 AAL37172 Q8VI24
Q546B3
AK129270 BAC98080 Q8VI24
AJ606045 CAE54289 Q8VI24
Q546B3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Satb2 NP_631885 H.sapiens SATB2 23314 Gene Info NP_001165980 100
R.norvegicus Satb2 501145   NP_001102776 99

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)