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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Edn1, Endothelin 1
Sequence ID:NM_010104
Entrez Gene ID:13614
Ensembl ID:ENSMUSG00000021367

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:13 A4|13 26.0

Chromosomal Position (from UCSC)

Chromosomal Position:13: 42301883 - 42306885

NM_010104 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
16894239663842397326
6908584239892542399093
85910174240031442400472
101811314240062342400736
113223444240214542403357

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5059522Full LengthBC029547endothelin 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034234  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010104 NP_034234 P22387
Q544E0
Endothelin

Related Sequences

 
mRNAGenPeptSwissProt
U35233 AAA97608 P22387
Q544E0
BC029547 AAH29547 P22387
Q544E0
S66650 AAP13983 P22387
D43775 BAA07830 P22387
AB081657 BAB86360 P22387
Q544E0
AK040778 BAC30702 P22387
Q544E0
AK152647 BAE31385 P22387
Q544E0
AK153437 BAE31994 P22387
Q544E0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Edn1 NP_034234 R.norvegicus Edn1 24323   NP_036680 91
H.sapiens EDN1 1906 Gene Info NP_001946 74

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta