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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Scnn1a, sodium channel, nonvoltage-gated 1 alpha
Sequence ID:NM_011324
Entrez Gene ID:20276
Ensembl ID:ENSMUSG00000030340

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 F3|6 60.6 cM

Chromosomal Position (from UCSC)

Chromosomal Position:6: 125321852 - 125344942

 Exon Info From UCSC:
NM_011324

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40111601Full LengthBC133688sodium channel, nonvoltage-gated 1 alpha
40111602Full LengthBC133689sodium channel, nonvoltage-gated 1 alpha
4165052IncompleteBC049952sodium channel, nonvoltage-gated 1 alpha

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035454  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011324 NP_035454 Q61180 ASC

Related Sequences

 
mRNAGenPeptSwissProt
U52006 AAA97412 Q61180
AF112185 AAD21244 Q61180
BC049952 AAH49952 Q80YC1
BC133688 AAI33689 Q3USG4
BC133689 AAI33690 Q3USG4
AK140389 BAE24368 Q3USG4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Scnn1a NP_035454 R.norvegicus Scnn1a 25122   NP_113736 95
H.sapiens SCNN1A 6337 Gene Info NP_001153048 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)