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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Pdgfb, platelet derived growth factor, B polypeptide
Sequence ID:NM_011057
Entrez Gene ID:18591
Ensembl ID:ENSMUSG00000000489

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15 E|15 46.8 cM

Chromosomal Position (from UCSC)

Chromosomal Position:15: 79997579 - 80013998

NM_011057 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1513967982630579827686
139715457982798579828133
154616907983075879830902
169118967983211179832316
189719867983375479833843
198720837983589879835994
208429567984436579845237

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
1380782Full LengthBC064056platelet derived growth factor, B polypeptide
6330609Full LengthBC053430platelet derived growth factor, B polypeptide
4946092IncompleteBC036976platelet derived growth factor, B polypeptide
5010396IncompleteBC023427platelet derived growth factor, B polypeptide

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035187  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011057 NP_035187   PDGF
PDGF_N

Related Sequences

 
mRNAGenPeptSwissProt
AF162784 AAD43587 P31240
Q549C6
BC023427 AAH23427 Q8R3X9
BC053430 AAH53430 P31240
BC064056 AAH64056 P31240

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pdgfb NP_035187 R.norvegicus Pdgfb 24628   NP_113712 97
H.sapiens PDGFB 5155 Gene Info NP_002599 90

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta