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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Mapre1, microtubule-associated protein, RP/EB family, member 1
Sequence ID:NM_007896
Entrez Gene ID:13589
Ensembl ID:ENSMUSG00000027479

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2 H1|2 84.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:2: 153741351 - 153767530

NM_007896 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1133153567022153567154
134257153571991153572114
258403153581666153581811
404611153583660153583867
612733153587271153587392
734886153590682153590834
8877327153592609153599049

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6815724Full LengthBC064444microtubule-associated protein, RP/EB family, member 1
5715929IncompleteBC052405microtubule-associated protein, RP/EB family, member 1
6815724IncompleteBC052728microtubule-associated protein, RP/EB family, member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031922  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007896 NP_031922 Q3U4H0
Q61166
CH
EB1

Related Sequences

 
mRNAGenPeptSwissProt
U51196 AAA96320 Q3U4H0
Q61166
BC052405 AAH52405 Q61166
BC064444 AAH64444 Q3U4H0
Q61166
AK154245 BAE32461 Q3U4H0
Q61166

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Mapre1 NP_031922 R.norvegicus Mapre1 114764   NP_612518 99
H.sapiens MAPRE1 22919 Gene Info NP_036457 97
N.crassa NCU00243 3873964   XP_957714 43
A.thaliana EB1C 836862   NP_201528 41
S.cerevisiae BIM1 856736   NP_010932 40
S.pombe mal3 2542123   NP_593678 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)