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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Mefv, Mediterranean fever
Sequence ID:NM_001161790
NM_001161791
NM_019453
Entrez Gene ID:54483
Ensembl ID:ENSMUSG00000022534

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16 A1|16 1.1 cM

Chromosomal Position (from UCSC)

Chromosomal Position:16: 3707217 - 3718097

 Exon Info From UCSC:
NM_001161790
NM_001161791
NM_019453

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40047838Full LengthBC108993Mediterranean fever
40047839Full LengthBC108994Mediterranean fever

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_062326  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001161790 NP_001155262    
NM_001161791 NP_001155263    
NM_019453 NP_062326 Q9JJ26 zf-B_box
PAAD_DAPIN

Related Sequences

 
mRNAGenPeptSwissProt
AF143409 AAF03766 Q9JJ26
BC108993 AAI08994 Q32MT1
BC108994 AAI08995 Q32MT0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Mefv NP_062326 R.norvegicus Mefv 58923   NP_113822 73
H.sapiens MEFV 4210 Gene Info NP_000234 55

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)