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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Sh3gl2, SH3-domain GRB2-like 2
Sequence ID:NM_019535
Entrez Gene ID:20404
Ensembl ID:ENSMUSG00000028488

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 C4|4 41.6 cM

Chromosomal Position (from UCSC)

Chromosomal Position:4: 85205576 - 85387810

NM_019535 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11668485135984851524
1672358499302784993095
2363088500123085001302
3094528502224485022387
4535868502329785023430
5877458502515585025313
7468498502730885027411
8509808503169385031823
98128068503345785035282

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4503038Full LengthBC018385SH3-domain GRB2-like 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_062408  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_019535 NP_062408 Q62420 SH3_1
BAR

Related Sequences

 
mRNAGenPeptSwissProt
U58886 AAC71774 Q62420
BC018385 AAH18385 Q62420
AF326561 AAL37407 Q62420
AF326562 AAL37408 Q62420
AK043424 BAC31546 Q8BXU5
AK044370 BAC31888 Q62420
AK134970 BAE22364 Q62420
AK139337 BAE23963 Q62420

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Sh3gl2 NP_062408 H.sapiens SH3GL2 6456 Gene Info NP_003017 99
R.norvegicus Sh3gl2 116743   XP_342858 99
S.pombe SPBC19C2.10 2540758   NP_595695 29
S.pombe mug137 2539113   NP_588493 29

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)