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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Lhx2, LIM homeobox protein 2
Sequence ID:NM_010710
Entrez Gene ID:16870
Ensembl ID:ENSMUSG00000000247

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 B|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 38351584 - 38369590

NM_010710 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
15863820682738207412
5877893820883038209032
79011933820996838210371
119413993821541738215622
140022863822436138225247

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6413339Full LengthBC055741LIM homeobox protein 2
6404838IncompleteBC086638LIM homeobox protein 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034840  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010710 NP_034840 Q9Z0S2
Q543C6
Homeobox
LIM

Related Sequences

 
mRNAGenPeptSwissProt
AF124734 AAD20012 Q9Z0S2
Q543C6
BC055741 AAH55741 Q9Z0S2
Q543C6
AK053572 BAC35432 Q9Z0S2
Q543C6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Lhx2 NP_034840 R.norvegicus Lhx2 296706   NP_001100041 100
H.sapiens LHX2 9355 Gene Info NP_004780 99
D.melanogaster ap 35509   NP_001163058 55
A.gambiae AgaP_AGAP008980 3291866   XP_552873 52
C.elegans ttx-3 181357   NP_509970 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)