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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Reg1, Regenerating islet-derived 1
Sequence ID:NM_009042
Entrez Gene ID:19692
Ensembl ID:ENSMUSG00000059654

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 C-D|6 33.5

Chromosomal Position (from UCSC)

Chromosomal Position:6: 78426968 - 78428666

NM_009042 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1257837597678376000
261327837627878376384
1332517837690678377024
2523897837731878377455
3905017837810778378218
5027697837839278378659

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
1263580Full LengthBC028761regenerating islet-derived 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033068  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009042 NP_033068 Q3TV26
P43137
Lectin_C

Related Sequences

 
mRNAGenPeptSwissProt
BC028761 AAH28761 Q3TV26
P43137
AK075798 BAC35967 Q8C6F9
AK133506 BAE21692 Q3TV26
P43137
AK160452 BAE35794 Q3TV26
P43137

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Reg1 NP_033068 R.norvegicus Reg1a 24714   NP_036773 87
H.sapiens REG1A 5967 Gene Info NP_002900 75

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)