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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Prg2, proteoglycan 2, bone marrow
Sequence ID:NM_008920
Entrez Gene ID:19074
Ensembl ID:ENSMUSG00000027073

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 D|2 50.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:2: 84980460 - 84983632

NM_008920 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1408482061784820656
411108482148284821551
1114218482216284822472
4225538482274584822876
5546658482331984823430
6668388482361684823788

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40055691Full LengthBC109348proteoglycan 2, bone marrow

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032946  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008920 NP_032946 Q61878
Q545D8
Lectin_C

Related Sequences

 
mRNAGenPeptSwissProt
BC109348 AAI09349 Q61878
Q545D8
AK010901 BAB27254 Q61878
Q545D8
AK156715 BAE33816 Q61878
Q545D8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Prg2 NP_032946 R.norvegicus Prg2 58826   NP_113807 84
H.sapiens PRG2 5553 Gene Info NP_002719 61

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)