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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Cdk5r1, cyclin-dependent kinase 5, regulatory subunit 1 (p35)
Sequence ID:NM_009871
Entrez Gene ID:12569
Ensembl ID:ENSMUSG00000048895

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 B5|11 46.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:11: 80477508 - 80478432

NM_009871 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
141348029054780294680

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6400348Full LengthBC046823cyclin-dependent kinase 5, regulatory subunit 1 (p35)
6533538Full LengthBC050768cyclin-dependent kinase 5, regulatory subunit 1 (p35)
6825809Full LengthBC058697cyclin-dependent kinase 5, regulatory subunit 1 (p35)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034001  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009871 NP_034001 P61809 CDK5_activator

Related Sequences

 
mRNAGenPeptSwissProt
U89527 AAB49474 P61809
AF121847 AAD21195 Q542T9
P61809
BC046823 AAH46823 P61809
BC050768 AAH50768 P61809
BC058697 AAH58697 P61809
AK043203 BAC31490 Q8BLT0
AK048617 BAC33394 Q8BKY0
AK079557 BAC37683 Q542T9
P61809
AK086621 BAC39703 Q8BJD8
AK039999 BAE20562 Q3V3I8
AK141549 BAE24731 Q542T9
P61809
AK169667 BAE41289 Q542T9
P61809

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cdk5r1 NP_034001 R.norvegicus Cdk5r1 116671   NP_446343 100
H.sapiens CDK5R1 8851 Gene Info NP_003876 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta