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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Panx1, pannexin 1
Sequence ID:NM_019482
Entrez Gene ID:55991
Ensembl ID:ENSMUSG00000031934

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9 A2|9

Chromosomal Position (from UCSC)

Chromosomal Position:9: 15005785 - 15045076

NM_019482 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
384701481022814810660
47111291481180414812462
113013501481447914814699
135114901482582514825964
149121121484930014849921

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6809247Full LengthBC049074pannexin 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_019482 NP_062355 Q9JIP4  

Related Sequences

 
mRNAGenPeptSwissProt
AF207817 AAF75838 Q9JIP4
BC049074 AAH49074 Q9JIP4
EU446265 ACA30451 B1PL19
AK014033 BAB29125 Q9JIP4
AK053871 BAC35567 Q9JIP4
AK089764 BAC40956 Q9JIP4
AK156194 BAE33619 Q3U181

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Panx1 NP_062355 R.norvegicus Panx1 315435   NP_955429 96
H.sapiens PANX1 24145 Gene Info NP_056183 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)