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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Adamts1, a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 1
Sequence ID:NM_009621
Entrez Gene ID:11504
Ensembl ID:ENSMUSG00000022893

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16 C3-C5|16 53.4 cM

Chromosomal Position (from UCSC)

Chromosomal Position:16: 85794180 - 85803113

NM_009621 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
2022928579407285796344
229324688579688385797058
246926448579796285798137
264528318579824885798434
283231188579865485798940
311932868579929085799457
328734198579978085799912
342037668580033485800680
376749048580222285803359

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3156736Full LengthBC040382a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 1
6505494Full LengthBC050834a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 1
3499206IncompleteBC003269a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033751  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009621 NP_033751 P97857 TSP_1
Reprolysin
Pep_M12B_propep
ADAM_spacer1

Related Sequences

 
mRNAGenPeptSwissProt
BC003269 AAH03269 Q05DU9
BC040382 AAH40382 P97857
BC050834 AAH50834 P97857
D67076 BAA11088 P97857
AK156830 BAE33869 Q3U0I4
AK161409 BAE36379 Q3TTE6
AK163622 BAE37426 Q3TQF7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Adamts1 NP_033751 R.norvegicus Adamts1 79252   NP_077376 96
H.sapiens ADAMTS1 9510 Gene Info NP_008919 83

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)