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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Btn1a1, butyrophilin, subfamily 1, member A1
Sequence ID:NM_013483
Entrez Gene ID:12231
Ensembl ID:ENSMUSG00000000706

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:13 A3.1|13 12.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:13: 23456998 - 23465807

NM_013483 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
723812354886123551235
238224082355162123551647
240924292355174123551761
243025792355233323552482
258028612355335423553635
286232122355610023556450
321333342355697023557091
333534542355765023557769

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3582574Full LengthBC031459butyrophilin, subfamily 1, member A1
3583827Full LengthBC011497butyrophilin, subfamily 1, member A1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038511  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_013483 NP_038511 Q62556 SPRY
V-set
C2-set_2

Related Sequences

 
mRNAGenPeptSwissProt
S80642 AAB35893 Q62556
BC009817 AAH09817 Q921X1
BC011497 AAH11497 Q62556
BC031459 AAH31459 Q62556
AK021333 BAB32377 Q9D1U4
AK142596 BAE25122 Q3UQC0
Q62556
AK145168 BAE26272 Q3UM26

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Btn1a1 NP_038511 R.norvegicus Btn1a1 306956   NP_001163808 90
H.sapiens BTN1A1 696 Gene Info NP_001723 74

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)