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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Scn1b, sodium channel, voltage-gated, type I, beta
Sequence ID:NM_011322
Entrez Gene ID:20266
Ensembl ID:ENSMUSG00000019194

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 B1|7 10.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:7: 31116523 - 31126945

NM_011322 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
546663190154231902154
6677383190224231902313
7398803190272431902865
88111213190792431908164
112212883191007331910239
128915683191168431911963

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3489368Full LengthBC009652sodium channel, voltage-gated, type I, beta
3672893Full LengthBC039140sodium channel, voltage-gated, type I, beta

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035452  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011322 NP_035452 P97952 ig

Related Sequences

 
mRNAGenPeptSwissProt
U85786 AAB49368 P97952
U46681 AAC53006 P97952
BC009652 AAH09652 P97952
BC039140 AAH39140 P97952

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Scn1b NP_035452 R.norvegicus Scn1b 29686   NP_058984 99
H.sapiens SCN1B 6324 Gene Info NP_001028 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)