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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Hba-x, hemoglobin X, alpha-like embryonic chain in Hba complex
Sequence ID:NM_010405
Entrez Gene ID:15126
Ensembl ID:ENSMUSG00000055609

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 A4|11 16.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:11: 32276601 - 32278113

NM_010405 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11593217659932176757
1603643217756832177772
3655983217787932178112

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5711898Full LengthBC051988hemoglobin X, alpha-like embryonic chain in Hba complex

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034535  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010405 NP_034535 P06467
Q78PA4
Globin

Related Sequences

 
mRNAGenPeptSwissProt
M26898 AAA37702 P06467
M13125 AAA37794 P06467
BC051988 AAH51988 P06467
Q78PA4
AK077590 BAC36881 P06467
Q78PA4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Hba-x NP_034535 R.norvegicus Hbz 287168   XP_002727803 92
H.sapiens HBZ 3050 Gene Info NP_005323 78

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)