Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Col9a3, collagen, type IX, alpha 3
Sequence ID:NM_009936
Entrez Gene ID:12841
Ensembl ID:ENSMUSG00000027570

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 H4|2 108.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:2: 180614143 - 180622189

 Exon Info From UCSC:
NM_009936

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5003028Full LengthBC030945collagen, type IX, alpha 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034066  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009936 NP_034066 Q8BSX1 Collagen

Related Sequences

 
mRNAGenPeptSwissProt
AF237721 AAF67684 Q9JKK4
BC030945 AAH30945 Q8K2L1
BC115437 AAI15438 Q14C48
AF349718 AAL56219 Q8VHY3
AK003258 BAB22674 Q9CTK5
AK030350 BAC26915 Q8BSX1
X91012 CAA62494 Q61248

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Col9a3 NP_034066 H.sapiens COL9A3 1299 Gene Info NP_001844 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)