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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Mmp10, matrix metallopeptidase 10
Sequence ID:NM_019471
Entrez Gene ID:17384
Ensembl ID:ENSMUSG00000047562

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9 A1|9

Chromosomal Position (from UCSC)

Chromosomal Position:9: 7502341 - 7510242

NM_019471 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
814675023597502497
14739175031457503389
39254075034807503628
54166675040607504185
66783175048317504995
83297375055267505667
974110775064567506589
1108126775072467507405
1268137175081007508203
1372172175098907510239

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40140858Full LengthBC130027matrix metallopeptidase 10

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_062344  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_019471 NP_062344 O55123 EC 3.4.24.22 Hemopexin
Peptidase_M10
PG_binding_1

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC130027 AAI30028 O55123
A1L3D0
EC 3.4.24.22
AY622970 AAT46401 Q6GXA1  
AK020292 BAB32058 O55123 EC 3.4.24.22
Y13185 CAA73641 O55123 EC 3.4.24.22

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Mmp10 NP_062344 R.norvegicus Mmp10 117061   NP_598198 90
H.sapiens MMP10 4319 Gene Info NP_002416 76

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)