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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Mm. Ifna2, Interferon alpha 2
Sequence ID:NM_010503
Entrez Gene ID:15965
Ensembl ID:ENSMUSG00000078354

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:4 C4|4 42.6

Chromosomal Position (from UCSC)

Chromosomal Position:4: 88683206 - 88683777

NM_010503 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100015694Full LengthBC148713interferon alpha 2
40043683IncompleteBC100699interferon alpha 2
40043688IncompleteBC100688interferon alpha 2
40043690IncompleteBC100689interferon alpha 2
40043691IncompleteBC114423interferon alpha 2
40043694IncompleteBC100698interferon alpha 2
100014776BC141454interferon alpha 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034633  

Protein Infomation

NM_010503 NP_034633 Q496V3

Related Sequences

K01411 AAA37885 P01573
BC100688 AAI00689 Q496W3
BC100689 AAI00690 Q496V3
BC100698 AAI00699 Q496V3
BC100699 AAI00700 Q496V3
BC114423 AAI14424 Q1WWM6
BC141454 AAI41455  
BC148713 AAI48714  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus Ifna2 NP_034633 M.musculus Ifna11 15964 Gene Info NP_032359 89
M.musculus Ifna1 15962 Gene Info NP_034632 86
M.musculus Ifna12 242519 Gene Info NP_796335 85
M.musculus Ifnab 15974 Gene Info NP_032362 84
M.musculus Ifna6 15969 Gene Info NP_996754 83
M.musculus Gm12597 242517 Gene Info NP_996753 83
M.musculus Ifna5 15968 Gene Info NP_034635 82
M.musculus Ifna7 15970 Gene Info NP_032360 81
M.musculus Ifna9 15972 Gene Info NP_034637 81
M.musculus Ifna14 404549 Gene Info NP_996858 81
M.musculus Gm13280 230398 Gene Info NP_996750 80
M.musculus Ifna13 230396 Gene Info NP_796321 80
R.norvegicus LOC680208 680208   XP_001056120 76
R.norvegicus Ifna5 690894   XP_001076062 76
R.norvegicus RGD1561246 502959   XP_578464 75
H.sapiens IFNA13 3447 Gene Info NP_008831 59
H.sapiens IFNA1 3439 Gene Info NP_076918 59

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)