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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Egln1, EGL nine homolog 1 (C. elegans)
Sequence ID:NM_053207
Entrez Gene ID:112405
Ensembl ID:ENSMUSG00000031987

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:8 E2|8

Chromosomal Position (from UCSC)

Chromosomal Position:8: 124910218 - 124948427

NM_053207 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12177127432486127434662
21782245127435640127435707
22462382127437916127438052
23832502127439560127439679
25033524127472132127473153

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3600175Full LengthBC006903EGL nine homolog 1 (C. elegans)
30446815IncompleteBC083146EGL nine homolog 1 (C. elegans)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_444437  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_053207 NP_444437 Q91YE3 EC 1.14.11.29 2OG-FeII_Oxy

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC006903 AAH06903 Q91YE3 EC 1.14.11.29
BC083146 AAH83146 Q5XJZ0  
AF453878 AAL65165 Q91YE3 EC 1.14.11.29
AJ310546 CAC42515 Q91YE3 EC 1.14.11.29

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Egln1 NP_444437 R.norvegicus Egln1 308913   XP_002728657 98
H.sapiens EGLN1 54583 Gene Info NP_071334 85
A.gambiae AgaP_AGAP003523 1274180   XP_313264 50
D.melanogaster Hph 40633   NP_730906 46

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)