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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Mesp1, mesoderm posterior 1
Sequence ID:NM_008588
Entrez Gene ID:17292
Ensembl ID:ENSMUSG00000030544

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 D3|7 39.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:7: 79792241 - 79793019

NM_008588 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
233728693712786937476
37310988693775086938475

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40130020Full LengthBC125505mesoderm posterior 1
40130022Full LengthBC125507mesoderm posterior 1
4006663IncompleteBC012689mesoderm posterior 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032614  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008588 NP_032614 P97309 HLH

Related Sequences

 
mRNAGenPeptSwissProt
BC125505 AAI25506 P97309
BC125507 AAI25508 P97309
D83674 BAA12041 P97309
AK006394 BAB24566 Q9CVV5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Mesp1 NP_032614 R.norvegicus Mesp1 308766   NP_001101001 91
H.sapiens MESP1 55897 Gene Info NP_061140 68

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)