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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Vegfc, vascular endothelial growth factor C
Sequence ID:NM_009506
Entrez Gene ID:22341
Ensembl ID:ENSMUSG00000031520

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8|8 B3

Chromosomal Position (from UCSC)

Chromosomal Position:8: 54159330 - 54159483

NM_009506 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13945516288555163278
3955965524231155242512
5977875524464655244836
7889395525437855254529
94010465526605555266161
104713805526644055266773
138118815527130755271807

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5002720Full LengthBC096377vascular endothelial growth factor C

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033532  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009506 NP_033532 P97953 PDGF
CXCXC

Related Sequences

 
mRNAGenPeptSwissProt
U58112 AAB46707 P97953
U73620 AAC52984 P97953
BC096377 AAH96377 P97953
EU862553 ACJ54375 C6F5S8
EU862554 ACJ54376 C6F5S9
EU862555 ACJ54377 C6F5T0
AK047844 BAC33172 P97953

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Vegfc NP_033532 R.norvegicus Vegfc 114111   NP_446105 97
H.sapiens VEGFC 7424 Gene Info NP_005420 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)