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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cyp51, cytochrome P450, family 51
Sequence ID:NM_020010
Entrez Gene ID:13121
Ensembl ID:ENSMUSG00000001467

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, kidney, liver, lung, lymphoreticular, mammary gland, muscle, nervous, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, retina, salivary gland, skin, spleen, stem cell, synovium, testis, thymus, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5 A2|5 1.2 cM

Chromosomal Position (from UCSC)

Chromosomal Position:5: 4082948 - 4104449

NM_020010 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1263040806734083302
2631279940864594086627
2800289540877774087872
2896309140918444092039
3092321140923874092506
3212338640991234099297
3387351341001444100270
3514369041011774101353
3691378941029274103025
3790435341041334104696

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4193738Full LengthBC031813cytochrome P450, family 51

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_064394  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_020010 NP_064394 Q8K0C4 EC 1.14.13.70 p450

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF166266 AAF73986 Q8K0C4 EC 1.14.13.70
BC031813 AAH31813 Q8K0C4 EC 1.14.13.70
AK002827 BAB22388 Q9CW87  
AK028355 BAC25900 Q8K0C4 EC 1.14.13.70
AK028815 BAC26134 Q8K0C4 EC 1.14.13.70
AK031059 BAC27231 Q8K0C4 EC 1.14.13.70
AK076983 BAC36548 Q8K0C4 EC 1.14.13.70

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cyp51 NP_064394 R.norvegicus Cyp51 25427   NP_037073 97
H.sapiens CYP51A1 1595 Gene Info NP_000777 91
S.pombe erg11 2542599   NP_592990 45
A.thaliana CYP51G1 837712   NP_172633 41
N.crassa NCU02624 3880198   XP_964049 40
S.cerevisiae ERG11 856398   NP_011871 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)