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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cxcr4, chemokine (C-X-C motif) receptor 4
Sequence ID:NM_009911
Entrez Gene ID:12767
Ensembl ID:ENSMUSG00000045382

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 E4|1 67.4 cM

Chromosomal Position (from UCSC)

Chromosomal Position:1: 128588198 - 128592280

NM_009911 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
81710130484775130486477
17111821130488765130488875

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2864967Full LengthBC098322chemokine (C-X-C motif) receptor 4
3592479Full LengthBC031665chemokine (C-X-C motif) receptor 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034041  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009911 NP_034041 P70658 7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
U59760 AAB07725 P70658
BC031665 AAH31665 P70658
BC098322 AAH98322 P70658
EF101560 ABK96809 A1E2I3
AB000803 BAA19187 P70658
X99582 CAA67894 P70658
Z80111 CAB02201 P70658
Z80112 CAB02202 P70658

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cxcr4 NP_034041 R.norvegicus Cxcr4 60628   NP_071541 97
H.sapiens CXCR4 7852 Gene Info NP_003458 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta