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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Tcf7l2, transcription factor 7 like 2, T cell specific, HMG box
Sequence ID:NM_001142918
NM_001142919
NM_001142920
NM_001142921
NM_001142922
NM_001142923
NM_001142924
NM_009333
Entrez Gene ID:21416
Ensembl ID:ENSMUSG00000024985

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19 D2|19 53.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:19: 55742057 - 55932197

 Exon Info From UCSC:
NM_001142918
NM_001142919
NM_001142920
NM_001142921
NM_001142922
NM_001142923
NM_001142924
NM_009333

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5702449Full LengthBC052022transcription factor 7-like 2, T-cell specific, HMG-box

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033359  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001142918 NP_001136390    
NM_001142919 NP_001136391    
NM_001142920 NP_001136392    
NM_001142921 NP_001136393    
NM_001142922 NP_001136394    
NM_001142923 NP_001136395    
NM_001142924 NP_001136396    
NM_009333 NP_033359 Q80WT9 HMG_box
CTNNB1_binding

Related Sequences

 
mRNAGenPeptSwissProt
AF107298 AAD16967 Q924A0
AF107299 AAD16968 Q924A0
BC052022 AAH52022 Q80WT9
AF363724 AAK77488 Q924A0
AF363725 AAK77489 Q924A0
AF363726 AAK77490 Q924A0
AY072035 AAL58534 Q924A0
AK035059 BAC28929 Q8BS68
AK038720 BAC30109 Q8CAI6
AK048536 BAC33366 Q924A0
AK084488 BAC39196 Q8C3Y9
AK132465 BAE21182 Q3V1G9
AJ223070 CAA11071 Q924A0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tcf7l2 NP_001136394 R.norvegicus Tcf7l2 679869   XP_001054844 98
H.sapiens TCF7L2 6934 Gene Info NP_001185455 97
A.gambiae AgaP_AGAP012389 1280326   XP_320170 54
D.melanogaster pan 43769   NP_001014685 48

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)