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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Rab11a, RAB11a, member RAS oncogene family
Sequence ID:NM_017382
Entrez Gene ID:53869
Ensembl ID:ENSMUSG00000004771

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:9|9 C

Chromosomal Position (from UCSC)

Chromosomal Position:9: 64716848 - 64737623

NM_017382 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
116896456310664564794
169017706457330864573388
177119646457443064574623
196521606457604064576235
216123336458539064585562

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2811973Full LengthBC010722RAB11a, member RAS oncogene family

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_059078  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_017382 NP_059078 P62492 Ras

Related Sequences

 
mRNAGenPeptSwissProt
BC010722 AAH10722 P62492
D50500 BAA09093 P97345
AK014268 BAB29233 P62492
AK132072 BAE20971 P62492
AK132159 BAE21003 P62492
AK147122 BAE27693 P62492
AB232605 BAF02867 Q0PD45

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Rab11a NP_059078 R.norvegicus Rab11a 81830   NP_112414 100
H.sapiens RAB11A 8766 Gene Info NP_004654 100
A.gambiae AgaP_AGAP004559 1274700   XP_001238825 95
D.melanogaster Rab11 42501   NP_599137 86
N.crassa NCU01523 3873094   XP_956972 85
C.elegans rab-11.1 171601   NP_490675 82
A.thaliana RAB11c 837490   NP_172434 72
S.pombe ypt3 2542219   NP_593667 71
S.cerevisiae YPT31 856753   NP_010948 65

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta