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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Hspb1, heat shock protein 1
Sequence ID:NM_013560
Entrez Gene ID:15507
Ensembl ID:ENSMUSG00000004951

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 G2|5 76.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:5: 135888142 - 135889292

NM_013560 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1516136363788136364303
517580136364918136364981
581903136365110136365432

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3498180Full LengthBC018257heat shock protein 1
30848584Full LengthBC099463heat shock protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038588  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_013560 NP_038588 P14602 HSP20

Related Sequences

 
mRNAGenPeptSwissProt
U03560 AAA18335 P14602
U03561 AAA18336 P14602
U03562 AAA18337 P14602
AF047377 AAD02432 Q9Z2L3
AF047378 AAD02433 Q9Z2L2
BC018257 AAH18257 P14602
Q545F4
BC099463 AAH99463 P14602
Q545F4
AK003119 BAB22579 P14602
Q545F4
AK010663 BAB27099 P14602
Q545F4
AK168927 BAE40740 P14602
Q545F4
X14687 CAA32818 P14602
X14686 CAB37341 P14602

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Hspb1 NP_038588 R.norvegicus Hspb1 24471   NP_114176 99
H.sapiens HSPB1 3315 Gene Info NP_001531 85

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta